Protein Data Bank File : 2vgh Title : GROWTH FACTOR 17-DEC-97 2VGH Number of Amino Acid Residues : 55 Amino Acid Sequence : 1 2 3 4 5 6 7 8 9 10 0 ALA ARG GLN GLU ASN PRO CYS GLY PRO CYS 10 SER GLU ARG ARG LYS HIS LEU PHE VAL GLN 20 ASP PRO GLN THR CYS LYS CYS SER CYS LYS 30 ASN THR ASP SER ARG CYS LYS ALA ARG GLN 40 LEU GLU LEU ASN GLU ARG THR CYS ARG CYS 50 ASP LYS PRO ARG ARG Main and Side Chain Dihedral Angles : Residue Type Phi Psi Omega Chi 1 Chi 2 Chi 3 Chi 4 1 ALA 0.0 -58.8 -178.3 2 ARG 76.0 142.0 -172.5 -162.6 178.4 176.1 -80.7 3 GLN 56.4 50.9 -179.8 -54.2 -55.4 -58.4 4 GLU 64.6 178.5 176.2 -48.4 -55.0 -75.3 5 ASN -150.5 84.6 177.5 -174.6 -108.6 6 PRO -55.8 129.1 -178.5 -26.1 35.6 7 CYS -137.3 168.9 175.9 -68.3 8 GLY -119.6 97.3 178.0 9 PRO -49.6 140.1 -175.9 -29.6 36.6 10 CYS -70.5 -53.5 179.2 -66.7 11 SER -72.6 158.5 -169.5 41.9 12 GLU -61.2 -78.0 -169.3 -71.3 -69.8 -72.4 13 ARG -137.1 -59.9 -172.2 -72.7 169.3 -66.7 -74.4 14 ARG -82.6 55.3 -171.9 -61.3 179.4 -178.3 78.7 15 LYS -84.1 41.8 -178.4 65.1 -169.5 94.2 -65.6 16 HIS -57.9 -41.4 -176.0 -59.6 90.9 17 LEU -94.9 41.0 176.9 -54.1 -179.2 18 PHE -138.8 159.5 169.5 -69.2 79.2 19 VAL -137.8 156.0 179.8 -65.9 20 GLN -140.1 133.2 -177.6 -177.7 170.7 -112.2 21 ASP -68.8 119.1 -174.5 179.6 81.6 22 PRO -83.3 44.8 172.2 36.4 -38.1 23 GLN -143.2 -54.7 -174.9 -56.0 -169.2 108.6 24 THR -99.7 -12.2 -178.4 61.7 25 CYS 64.8 22.9 176.0 -53.6 26 LYS -76.3 132.5 -174.6 -69.6 171.4 62.7 174.1 27 CYS -98.9 142.8 169.5 -50.9 28 SER -140.9 147.0 171.7 -64.1 29 CYS -71.6 138.4 177.5 -81.2 30 LYS -61.9 -35.6 177.9 -170.7 176.4 178.7 64.8 31 ASN -101.2 113.0 -178.6 174.9 36.6 32 THR -99.9 160.8 177.4 61.9 33 ASP -61.3 -27.4 172.9 -169.2 79.7 34 SER -55.1 -46.0 -180.0 -54.5 35 ARG -66.7 -44.6 177.4 -47.7 -158.7 -46.9 163.1 36 CYS -58.1 -47.1 179.1 -59.4 37 LYS -59.1 -41.5 174.7 -177.1 169.8 61.7 173.7 38 ALA -61.4 -25.1 174.7 39 ARG -99.8 9.2 -179.3 -67.2 -175.7 -76.1 -89.6 40 GLN 59.8 50.8 178.8 -67.0 70.0 75.3 41 LEU -140.1 176.0 173.5 -63.6 170.2 42 GLU -130.0 154.1 -175.9 -72.6 174.4 37.5 43 LEU -83.0 133.2 168.7 -172.1 73.7 44 ASN -89.2 100.6 -169.9 176.1 -2.4 45 GLU -60.8 -12.4 -177.8 -61.8 -177.5 -84.7 46 ARG -79.2 -54.6 -179.7 -60.4 -179.8 -177.0 -79.1 47 THR -96.0 -14.1 -174.9 -173.6 48 CYS 53.5 56.9 169.8 -72.8 49 ARG -128.1 156.6 -172.8 -69.5 -179.8 -73.6 164.3 50 CYS -89.3 126.7 179.2 -59.4 51 ASP -121.4 174.6 -177.1 67.7 -79.2 52 LYS -55.6 140.1 -170.9 -59.0 -179.6 98.3 -64.7 53 PRO -67.8 -73.5 169.9 23.7 -29.6 54 ARG -154.0 67.4 177.2 -152.7 -71.3 71.9 71.5 55 ARG -135.4 98.9 0.0 -68.3 -86.2 69.8 -104.5 Alpha Carbon Cartesian Coordinates : Residue Type X Y Z 1 ALA 5.341 -21.961 8.635 2 ARG 4.405 -24.179 5.634 3 GLN 0.871 -25.500 4.904 4 GLU -0.537 -21.991 5.584 5 ASN -0.571 -20.131 8.930 6 PRO -4.102 -19.502 10.343 7 CYS -4.181 -16.227 12.340 8 GLY -6.602 -13.810 14.054 9 PRO -6.123 -10.220 12.717 10 CYS -5.849 -7.532 15.424 11 SER -7.941 -4.827 13.708 12 GLU -11.690 -5.291 13.089 13 ARG -12.547 -5.465 9.353 14 ARG -11.242 -2.547 7.236 15 LYS -7.583 -3.428 7.984 16 HIS -6.252 -1.843 4.756 17 LEU -3.421 -0.090 6.647 18 PHE -2.162 -3.289 8.396 19 VAL 0.071 -6.319 7.778 20 GLN 0.382 -9.546 9.835 21 ASP 3.333 -11.973 10.043 22 PRO 2.212 -15.329 8.487 23 GLN 4.137 -17.408 11.088 24 THR 3.726 -15.741 14.515 25 CYS 0.483 -13.788 13.738 26 LYS 2.122 -10.580 15.068 27 CYS 0.315 -7.477 13.728 28 SER 1.879 -4.213 12.542 29 CYS 0.411 -1.110 10.913 30 LYS 1.422 -0.648 7.258 31 ASN 1.943 3.070 8.054 32 THR 4.523 3.529 10.846 33 ASP 5.370 6.600 12.959 34 SER 8.752 6.623 11.161 35 ARG 6.951 7.606 7.923 36 CYS 4.838 10.246 9.711 37 LYS 8.008 11.681 11.346 38 ALA 9.668 11.855 7.891 39 ARG 6.626 14.003 6.878 40 GLN 6.816 16.011 10.191 41 LEU 3.665 14.330 11.592 42 GLU 2.868 11.642 14.227 43 LEU 0.872 8.389 13.883 44 ASN -2.667 8.041 15.278 45 GLU -2.228 4.407 16.405 46 ARG -6.011 3.705 16.212 47 THR -6.571 4.313 12.463 48 CYS -2.808 4.341 11.627 49 ARG -2.893 7.612 9.666 50 CYS -0.576 10.609 10.171 51 ASP -1.903 13.606 12.175 52 LYS -0.423 16.887 13.512 53 PRO 2.666 16.252 15.726 54 ARG 2.061 18.578 18.709 55 ARG 0.725 21.795 17.154 Richards-Kundrot Secondary Structure Assignment : 1 2 3 4 5 6 7 8 9 10 0 T T T T/S S S S S S S/S 10 S S S C C C S S S S 20 S/T T T T S S S S S S 30 C H H H H H H H H H/S 40 S S S S/T T T T S S S 50 S S/S S S S Kabsch-Sander Secondary Structure Assignment : 1 2 3 4 5 6 7 8 9 10 0 S S 10 S S t T e E E E 20 e T T T t e E E E e 30 S h H H H H H H h T 40 t E E E T T T T E E 50 E S Buried Surface Area Percentages : Residue Type Buried Area % Buried % Polar Cover 1 ALA 46.7 64.4 79.5 2 ARG 27.0 12.9 87.9 3 GLN 33.0 22.2 84.4 4 GLU 0.5 0.3 83.9 5 ASN 95.6 79.1 52.5 6 PRO 16.0 12.8 84.7 7 CYS 86.9 87.6 65.8 8 GLY 0.0 0.0 73.3 9 PRO 74.0 59.4 70.5 10 CYS 35.4 35.7 73.0 11 SER 59.2 70.8 51.3 12 GLU 27.5 19.8 88.4 13 ARG 62.1 29.7 83.5 14 ARG 39.1 18.7 84.5 15 LYS 114.8 66.2 63.3 16 HIS 21.3 14.2 75.3 17 LEU 83.4 56.4 58.7 18 PHE 129.8 77.8 56.6 19 VAL 39.3 33.1 71.6 20 GLN 119.4 80.4 54.6 21 ASP 59.3 53.7 66.1 22 PRO 33.9 27.2 78.9 23 GLN 56.0 37.7 79.2 24 THR 39.6 37.0 66.5 25 CYS 69.3 69.8 73.9 26 LYS 25.9 15.0 82.3 27 CYS 87.7 88.4 57.7 28 SER 19.5 23.3 76.3 29 CYS 84.4 85.1 50.9 30 LYS 62.1 35.8 73.6 31 ASN 113.5 93.9 54.2 32 THR 45.5 42.5 72.5 33 ASP 49.8 45.1 59.9 34 SER 17.2 20.6 76.1 35 ARG 94.7 45.3 79.9 36 CYS 99.2 100.0 54.1 37 LYS 34.0 19.6 89.3 38 ALA 15.4 21.2 81.2 39 ARG 102.7 49.2 70.6 40 GLN 23.3 15.7 85.3 41 LEU 96.5 65.3 58.3 42 GLU 60.4 43.6 73.8 43 LEU 133.6 90.4 51.1 44 ASN 60.7 50.2 65.5 45 GLU 13.9 10.0 77.7 46 ARG 8.4 4.0 91.5 47 THR 65.7 61.5 73.3 48 CYS 97.1 97.9 45.2 49 ARG 57.8 27.7 76.4 50 CYS 90.4 91.2 59.9 51 ASP 43.9 39.7 73.9 52 LYS 46.9 27.1 72.4 53 PRO 84.7 68.0 61.6 54 ARG 30.6 14.7 89.6 55 ARG 43.8 21.0 88.9